Genome Analysis Toolkit (GATK)

Genome Analysis Toolkit (GATK)

Broad Institute From United States

The Genome Analysis Toolkit (GATK), created at the Broad Institute's Data Sciences Platform, specializes in variant discovery and genotyping. Its advanced processing engi... The Genome Analysis Toolkit (GATK), created at the Broad Institute's Data Sciences Platform, specializes in variant discovery and genotyping. Its advanced processing engine supports large-scale projects, identifying SNPs and indels in germline DNA and RNAseq data. The toolkit also extends its capabilities to somatic variant calling and copy number variation analysis, integrating essential utilities for sequencing data processing and quality control, while accommodating various sequencing technologies.

Top Genome Analysis Toolkit (GATK) Alternatives

1 Alissa Interpret

Alissa Interpret

Alissa Interpret serves as a universal genomic data interpretation software designed for clinical decision support. It enhances productivity by streamlining...

Agilent Technologies From United States
2 Bioconductor

Bioconductor

The Bioconductor project develops and shares open-source software tailored for precise analysis of biological data, fostering a collaborative community of...

Bioconductor From United States
3 Microsoft Genomics

Microsoft Genomics

Microsoft Genomics empowers researchers with cloud-based genome sequencing and analysis through the Burrows-Wheeler Aligner (BWA) and Genome Analysis Toolkit (GATK)....

Microsoft From United States
11 votes
4 Loupe Browser

Loupe Browser

Loupe Browser v8.1 offers an intuitive platform for visualizing and analyzing 10x Genomics Chromium and Visium datasets. With the ability...

10x Genomics From United States
5 ROSALIND

ROSALIND

This advanced genomics data analysis software empowers scientists to seamlessly analyze next-generation sequencing data without requiring programming skills. It offers...

ROSALIND (formerly OnRamp Bio) From United States
6 GeoMx Digital Spatial Profiler (DSP)

GeoMx Digital Spatial Profiler (DSP)

The GeoMx Digital Spatial Profiler (DSP) revolutionizes spatial multiomics by enabling researchers to non-destructively analyze RNA and protein expression in...

nanoString From United States
7 BioTuring Browser

BioTuring Browser

The BioTuring Browser is a powerful genomics data analysis software designed for researchers working with single-cell datasets. It enables users...

BioTuring From United States
8 SOPHiA GENETICS

SOPHiA GENETICS

Leveraging AI and cloud technology, SOPHiA GENETICS empowers clinicians to derive real-time insights for cancer and rare disorder patients. With...

SOPHiA GENETICS From Switzerland
9 Cellenics

Cellenics

Redefining single-cell RNA sequencing analysis, the community instance of Cellenics, now known as Trailmaker, empowers researchers to effortlessly explore complex...

Biomage From United Kingdom
10 Galaxy

Galaxy

Galaxy is an open-source, web-based platform designed for data-intensive life science research. It facilitates analysis of deep sequencing data, phylogenetic...

From United States
11 Parse Biosciences Evercode

Parse Biosciences Evercode

Parse Biosciences Evercode revolutionizes single-cell research by enabling the profiling of up to 5 million cells in a single experiment...

Parse Biosciences From United States
12 MEGA

MEGA

MEGA12 enhances performance and usability with new filtering methods that optimize substitution models and an adaptive bootstrap for Maximum Likelihood...

From United States
13 BigOmics Analytics

BigOmics Analytics

Omics Playground revolutionizes data analysis for biologists and bioinformaticians, enhancing collaboration effectiveness by 75%. This interactive platform simplifies RNA-seq and...

BigOmics Analytics From Switzerland
14 SnapGene

SnapGene

SnapGene revolutionizes molecular biology with its intuitive interface, enabling scientists to visualize and design cloning procedures effortlessly. The software automates...

SnapGene From United States
15 Geneyx

Geneyx

Geneyx Analysis streamlines next-generation sequencing (NGS) data processing, transforming raw FASTQ files into clinically relevant reports for labs. By leveraging...

Geneyx Genomex Ltd. From Netherlands

Company Information

  • Company: Broad Institute
  • Country: United States

We use cookies to improve your experience on eBool.